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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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Name: IS1216E (Synonyms: ISS1Y, ISEfa14) |
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Family: IS6 |
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Evidence of Transposition: yes |
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Host |
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Host Organism: | Enterococcus faecium | | |
Place of Origin: | Japan | | |
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Map |
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Terminal Inverted Repeats (IR) |
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IRL (Length: 23 bp) | | GGTTCTGTTGCAAAGTTTTAAAT |
IRR (Length: 23 bp) | | GGTTCTGTTGCAAAGTTTTAAAT |
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Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGTTCTGTTG CAAAGTTTTA AATCTACTAT CAAATAAGGT AGAATAATAG AAAAAGATAG CAGGAGGAAT GACGATGAAT CATTTTAAAG GAAAGCAATT 100
TCAGCAGGAT GTGATTATTG TAGCCGTGGG CTACTATCTT CGTTATAACC TTAGCTATCG TGAAGTTCAA GAAATCTTAT ATGATCGTGG CATTAACGTT 200
TCTCATACGA CGATTTATCG TTGGGTGCAA GAATATGGCA AACTACTCTA TCAAATTTGG AAAAAGAAAA ATAAAAAATC CTTTTATTCA TGGAAAATGG 300
ATGAAACGTA CATCAAAATT AAAGGAAAAT GGCATTATTT GTATCGAGCC ATCGATGCAG ATGGTTTAAC CTTGGATATT TGGTTACGTA AAAAACGGGA 400
CACACAAGCA GCCTATGCTT TTCTTAAGCG GTTAGTGAAG CAGTTTGATG AACCGAAGGT TGTAGTCACA GATAAAGCCC CCTCTATTAC AAGTGCCTTT 500
AAGAAACTAA AAGAATACGG CTTTTATCAA GGGACAGAAC ATCGTACCAT TAAATACCTG AATAATTTGA TTGAACAAGA CCATCGTCCA GTAAAGAGAC 600
GCAATAAATT CTATCGAAGT TTACGCACTG CCTCTACCAC GATTAAAGGC ATGGAAGCCA TTCGAGGATT ATATAAGAAA ACCCGAAAAG AAGGCACTCT 700
CTTCGGGTTT TCGGTCTGTA CTGAAATCAA GGTATTATTG GGAATCCCAG CTTAAATCAT AGATACCGTA AGGGATTTTA TTCTTTATTT AAAACTTTGC 800
AACAGAACC
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ORFs |
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Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
tnp |
IS1216E |
69-755 |
Transposase |
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Gene Name |
Protein Name |
Associated TE |
Length |
Coordinates |
Strand |
tnp |
Tnp |
IS1216E |
687 |
69-755 |
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Class: | Transposase |
Transpoase Chemistry: | DDE |
Protein Sequence:
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MTMNHFKGKQ FQQDVIIVAV GYYLRYNLSY REVQEILYDR GINVSHTTIY RWVQEYGKLL YQIWKKKNKK SFYSWKMDET YIKIKGKWHY LYRAIDADGL TLDIWLRKKR DTQAAYAFLK RLVKQFDEPK VVVTDKAPSI TSAFKKLKEY GFYQGTEHRT IKYLNNLIEQ DHRPVKRRNK FYRSLRTAST TIKGMEAIRG LYKKTRKEGT LFGFSVCTEI KVLLGIPA
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